Notebooks

ImputeGAP comes with ready-to-use Jupyter and Google Colab notebooks that illustrate key functionalities of the library. These notebooks provide hands-on examples for both the imputation pipeline and advanced analysis, helping users understand how to configure, run, and interpret the results of the system.

Jupyter Notebooks

The following notebooks are available for local use or execution in Jupyter environments:


Google Colab Notebooks

The following notebooks can be run directly in your browser using Google Colab. They are ideal for quick testing and exploration without requiring any local setup:


Dockerized Notebooks

To install ImputeGAP, pre-configured with Jupyter Notebook, as a Docker container:

Launch Docker from desktop of terminal. To make sure it is running:

docker version

Pull the ImputeGAP Docker image:

docker pull qnater/imputegap:1.1.1

Run the Docker container:

docker run -p 8888:8888 qnater/imputegap:1.1.1

Open the following link:

http://127.0.0.1:8888